Beam RNA Interaction mOtif search tool
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BRIO (BEAM RNA Interaction mOtifs) is a web server designed for searching known sequence and structure protein binding motifs in RNA molecules of interest
Paste RNAs
Input RNA
HSUR D. melanogaster example
U2 D. melanogaster example
Or upload your RNAs
Input File (multiFASTA w/ or w/o dot-bracket)
Background File (multiFASTA w/ or w/o dot-bracket, optional)
Select at least one species and one type of experiments:
Human (hg19-hg38)
Mouse (mm9-mm10-GRCm39)
Drosophila (dm6)
Zebrafish (zv9-dr10-danRer11)
Elegans (ce11)
Arabidopsis (tair10)
Yeast (sacCer3)
Select all CLIP experiments
Global
eCLIP
HITS-CLIP
PAR-CLIP
iCLIP
CLIP-seq
iCLAP
4SU-iCLIP
PIP-seq
urea-iCLIP
BrdU-CLIP
Fr-CLIP
Email (optional)
Go!