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BRIO
(BEAM RNA Interaction mOtifs) is a web server designed for searching known sequence and structure protein binding motifs in RNA molecules of interest.
Paste RNAs
INPUT RNA
[object Object]
Precomputed runs:
Example 1
Example 2
Or upload your RNAs
INPUT FILE (multiFASTA w/ or w/o dot-bracket)
OR
BACKGROUND FILE (multiFASTA, optional)
Select species and type of experiments:
SPECIES
Human (hg19-hg38)
Mouse (mm9-mm10-GRCm39)
Drosophila (dm6)
Zebrafish (zv9-dr10-danRer11)
Elegans (ce11)
Arabidopsis (tair10)
Yeast (sacCer3)
CLIP EXPERIMENTS
Select all CLIP experiments
Global
eCLIP
HITS-CLIP
PAR-CLIP
iCLIP
CLIP-seq
iCLAP
4SU-iCLIP
PIP-seq
urea-iCLIP
BrdU-CLIP
Fr-CLIP
EMAIL (OPTIONAL)
Run Analysis →